Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dchs1E9PVD3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dchs1E9PVD3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Gm10698-201ENSMUST00000182663 604 ntBASIC16.91■□□□□ 0.3
Dchs1E9PVD3 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Golph3-202ENSMUST00000226517 2359 ntBASIC16.91■□□□□ 0.3
Dchs1E9PVD3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Mir1199-201ENSMUST00000117015 119 ntBASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dchs1E9PVD3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.89■□□□□ 0.3
Dchs1E9PVD3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Dchs1E9PVD3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Dchs1E9PVD3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Dchs1E9PVD3 Gm10517-202ENSMUST00000192970 758 ntBASIC16.89■□□□□ 0.29
Dchs1E9PVD3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.89■□□□□ 0.29
Dchs1E9PVD3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Dchs1E9PVD3 Gm25925-201ENSMUST00000158314 306 ntBASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Gm2559-201ENSMUST00000201323 363 ntBASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dchs1E9PVD3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Mir5122-201ENSMUST00000175004 89 ntBASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Dio3-201ENSMUST00000097228 1449 ntBASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Dchs1E9PVD3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.86■□□□□ 0.29
Dchs1E9PVD3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Dchs1E9PVD3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Gm27741-201ENSMUST00000185060 237 ntBASIC16.85■□□□□ 0.29
Dchs1E9PVD3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms