Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28043E0CXC2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.86■□□□□ 0.61
Gm28043E0CXC2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28043E0CXC2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28043E0CXC2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Gm45417-201ENSMUST00000209533 758 ntBASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28043E0CXC2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.83■□□□□ 0.61
Gm28043E0CXC2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28043E0CXC2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm28043E0CXC2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.83■□□□□ 0.61
Gm28043E0CXC2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28043E0CXC2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm28043E0CXC2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms