Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Trim30cD3YVI9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30cD3YVI9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30cD3YVI9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30cD3YVI9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30cD3YVI9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Trim30cD3YVI9 Rarb-207ENSMUST00000225921 2756 ntBASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Gm26833-201ENSMUST00000180899 440 ntBASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30cD3YVI9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.5■□□□□ 0.87
Trim30cD3YVI9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Smad6-203ENSMUST00000179458 273 ntBASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim30cD3YVI9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30cD3YVI9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30cD3YVI9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.48■□□□□ 0.87
Trim30cD3YVI9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30cD3YVI9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim30cD3YVI9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim30cD3YVI9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim30cD3YVI9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim30cD3YVI9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms