Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hist1h2abC0HKE1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.25■□□□□ 0.35
Hist1h2abC0HKE1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Gm11421-201ENSMUST00000122124 294 ntBASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h2abC0HKE1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h2abC0HKE1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Smad6-203ENSMUST00000179458 273 ntBASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h2abC0HKE1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Gm27454-201ENSMUST00000185090 204 ntBASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h2abC0HKE1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hist1h2abC0HKE1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2abC0HKE1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms