Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm5640A3KG49 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Etf1-202ENSMUST00000180351 108 ntBASIC19.18■□□□□ 0.66
Gm5640A3KG49 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.18■□□□□ 0.66
Gm5640A3KG49 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5640A3KG49 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.18■□□□□ 0.66
Gm5640A3KG49 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm5640A3KG49 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.17■□□□□ 0.66
Gm5640A3KG49 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Gm5921-201ENSMUST00000075898 882 ntBASIC19.17■□□□□ 0.66
Gm5640A3KG49 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5640A3KG49 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.16■□□□□ 0.66
Gm5640A3KG49 Gm43566-201ENSMUST00000196851 808 ntBASIC19.16■□□□□ 0.66
Gm5640A3KG49 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Gm9870-201ENSMUST00000063874 645 ntBASIC19.16■□□□□ 0.66
Gm5640A3KG49 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm5640A3KG49 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.15■□□□□ 0.66
Gm5640A3KG49 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Gm13238-201ENSMUST00000117655 780 ntBASIC19.15■□□□□ 0.66
Gm5640A3KG49 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Gm10232-201ENSMUST00000089221 720 ntBASIC19.15■□□□□ 0.66
Gm5640A3KG49 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm5640A3KG49 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm5640A3KG49 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.14■□□□□ 0.66
Gm5640A3KG49 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm5640A3KG49 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm5640A3KG49 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm5640A3KG49 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5640A3KG49 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.14■□□□□ 0.65
Gm5640A3KG49 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5640A3KG49 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Gm5640A3KG49 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5640A3KG49 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5640A3KG49 Gm40881-201ENSMUST00000223397 166 ntBASIC19.13■□□□□ 0.65
Gm5640A3KG49 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5640A3KG49 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5640A3KG49 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.12■□□□□ 0.65
Gm5640A3KG49 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5640A3KG49 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.11■□□□□ 0.65
Gm5640A3KG49 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.11■□□□□ 0.65
Gm5640A3KG49 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.11■□□□□ 0.65
Gm5640A3KG49 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5640A3KG49 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms