Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom2A2ALU4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Gm12382-201ENSMUST00000122005 922 ntBASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom2A2ALU4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Gm11927-201ENSMUST00000118472 759 ntBASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Gm43183-201ENSMUST00000200632 547 ntBASIC30.31■■■□□ 2.44
Shroom2A2ALU4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom2A2ALU4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Shroom2A2ALU4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Shroom2A2ALU4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC30.3■■■□□ 2.44
Shroom2A2ALU4 Gm43672-201ENSMUST00000199072 1731 ntBASIC30.3■■■□□ 2.44
Shroom2A2ALU4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Shroom2A2ALU4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Shroom2A2ALU4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom2A2ALU4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Shroom2A2ALU4 Gm17661-201ENSMUST00000170317 270 ntBASIC30.29■■■□□ 2.44
Shroom2A2ALU4 Gm45058-201ENSMUST00000205810 766 ntBASIC30.29■■■□□ 2.44
Shroom2A2ALU4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom2A2ALU4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
Shroom2A2ALU4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom2A2ALU4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom2A2ALU4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC30.28■■■□□ 2.44
Shroom2A2ALU4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom2A2ALU4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom2A2ALU4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
Shroom2A2ALU4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC30.27■■■□□ 2.44
Shroom2A2ALU4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Shroom2A2ALU4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Shroom2A2ALU4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Shroom2A2ALU4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Shroom2A2ALU4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC30.26■■■□□ 2.44
Shroom2A2ALU4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.44
Shroom2A2ALU4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Shroom2A2ALU4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Shroom2A2ALU4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom2A2ALU4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom2A2ALU4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom2A2ALU4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC30.23■■■□□ 2.43
Shroom2A2ALU4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom2A2ALU4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom2A2ALU4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Shroom2A2ALU4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Shroom2A2ALU4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom2A2ALU4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom2A2ALU4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom2A2ALU4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom2A2ALU4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom2A2ALU4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Shroom2A2ALU4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Shroom2A2ALU4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Shroom2A2ALU4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC30.2■■■□□ 2.43
Shroom2A2ALU4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom2A2ALU4 Gm43909-201ENSMUST00000203443 1876 ntBASIC30.2■■■□□ 2.43
Shroom2A2ALU4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom2A2ALU4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom2A2ALU4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Shroom2A2ALU4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Shroom2A2ALU4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Shroom2A2ALU4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Shroom2A2ALU4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Shroom2A2ALU4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Shroom2A2ALU4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC30.17■■■□□ 2.42
Shroom2A2ALU4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC30.17■■■□□ 2.42
Shroom2A2ALU4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Shroom2A2ALU4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Shroom2A2ALU4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC30.16■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms