Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IsxA1A546 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 AA386476-201ENSMUST00000098781 1665 ntBASIC17.53■□□□□ 0.4
IsxA1A546 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Gm45102-201ENSMUST00000207427 857 ntBASIC17.53■□□□□ 0.4
IsxA1A546 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
IsxA1A546 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IsxA1A546 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IsxA1A546 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IsxA1A546 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IsxA1A546 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.52■□□□□ 0.4
IsxA1A546 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IsxA1A546 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.52■□□□□ 0.4
IsxA1A546 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IsxA1A546 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.52■□□□□ 0.4
IsxA1A546 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.52■□□□□ 0.4
IsxA1A546 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IsxA1A546 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IsxA1A546 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IsxA1A546 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
IsxA1A546 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IsxA1A546 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IsxA1A546 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
IsxA1A546 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.51■□□□□ 0.39
IsxA1A546 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.51■□□□□ 0.39
IsxA1A546 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.51■□□□□ 0.39
IsxA1A546 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IsxA1A546 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Gm7143-201ENSMUST00000222811 859 ntBASIC17.51■□□□□ 0.39
IsxA1A546 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IsxA1A546 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.51■□□□□ 0.39
IsxA1A546 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IsxA1A546 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
IsxA1A546 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.5■□□□□ 0.39
IsxA1A546 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IsxA1A546 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IsxA1A546 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
IsxA1A546 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IsxA1A546 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IsxA1A546 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IsxA1A546 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IsxA1A546 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
IsxA1A546 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IsxA1A546 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms