Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Rarb-207ENSMUST00000225921 2756 ntBASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.77■□□□□ 0.12
Rpl23a-ps3A0A140T8M7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms