Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13n-1A0A0G2JEU8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Reep4-203ENSMUST00000226563 1444 ntBASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm29257-201ENSMUST00000186115 639 ntBASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 AA386476-201ENSMUST00000098781 1665 ntBASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-1A0A0G2JEU8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm13234-201ENSMUST00000120010 747 ntBASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms