Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav11A0A0B4J1J9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav11A0A0B4J1J9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav11A0A0B4J1J9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.96□□□□□ -0.34
Trav11A0A0B4J1J9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav11A0A0B4J1J9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav11A0A0B4J1J9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav11A0A0B4J1J9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav11A0A0B4J1J9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav11A0A0B4J1J9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav11A0A0B4J1J9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.94□□□□□ -0.34
Trav11A0A0B4J1J9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms