Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gm10698-201ENSMUST00000182663 604 ntBASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv16-104A0A0B4J1I1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms