Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trbv20A0A0B4J1H5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv20A0A0B4J1H5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv20A0A0B4J1H5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv20A0A0B4J1H5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.91■□□□□ 0.3
Trbv20A0A0B4J1H5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv20A0A0B4J1H5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv20A0A0B4J1H5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv20A0A0B4J1H5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv20A0A0B4J1H5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms