Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gm12366-201ENSMUST00000121722 873 ntBASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Gm5786-201ENSMUST00000085368 882 ntBASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-3A0A0B4J1H2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms