Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm26571-201ENSMUST00000181399 666 ntBASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Gm7514-201ENSMUST00000209475 934 ntBASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trbv12-1A0A0B4J1H0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-1A0A0B4J1H0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms