Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Rarb-207ENSMUST00000225921 2756 ntBASIC17.85■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sirpb1aA0A0A6YYP6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms