Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Dio3-201ENSMUST00000097228 1449 ntBASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-4A0A0A6YXF1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.71■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm18666-201ENSMUST00000190039 958 ntBASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.67■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-4A0A0A6YXF1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms