Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbc1A0A0A6YWV4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Rarb-207ENSMUST00000225921 2756 ntBASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.3■□□□□ 0.36
Trbc1A0A0A6YWV4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbc1A0A0A6YWV4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbc1A0A0A6YWV4 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Gm10849-201ENSMUST00000100397 618 ntBASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbc1A0A0A6YWV4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trbc1A0A0A6YWV4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
Trbc1A0A0A6YWV4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbc1A0A0A6YWV4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm42569-201ENSMUST00000200539 472 ntBASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbc1A0A0A6YWV4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms