Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav6-5A0A075B6B5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-5A0A075B6B5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav6-5A0A075B6B5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav6-5A0A075B6B5 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.67□□□□□ -0.06
Trav6-5A0A075B6B5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-5A0A075B6B5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-5A0A075B6B5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Trav6-5A0A075B6B5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-5A0A075B6B5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-5A0A075B6B5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-5A0A075B6B5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Etf1-202ENSMUST00000180351 108 ntBASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-5A0A075B6B5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms