Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-1A0A075B699 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 BC021767-201ENSMUST00000126387 1716 ntBASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-1A0A075B699 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Spcs1-204ENSMUST00000226782 949 ntBASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-1A0A075B699 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Gm12251-201ENSMUST00000117893 792 ntBASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-1A0A075B699 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-1A0A075B699 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-1A0A075B699 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Trav9d-1A0A075B699 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-1A0A075B699 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav9d-1A0A075B699 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-1A0A075B699 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-1A0A075B699 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Gm21956-201ENSMUST00000179946 522 ntBASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-1A0A075B699 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms