Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trav13-2A0A075B649 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Gm15820-201ENSMUST00000201566 728 ntBASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-2A0A075B649 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-2A0A075B649 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-2A0A075B649 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav13-2A0A075B649 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav13-2A0A075B649 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Trav13-2A0A075B649 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Trav13-2A0A075B649 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-2A0A075B649 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms