Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 AA386476-201ENSMUST00000098781 1665 ntBASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7-6A0A075B640 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.23□□□□□ -0.29
Trav7-6A0A075B640 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav7-6A0A075B640 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7-6A0A075B640 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.3
Trav7-6A0A075B640 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7-6A0A075B640 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7-6A0A075B640 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav7-6A0A075B640 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7-6A0A075B640 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7-6A0A075B640 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7-6A0A075B640 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms