Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-7-dv9A0A075B639 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm43017-201ENSMUST00000198296 752 ntBASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-7-dv9A0A075B639 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm40848-201ENSMUST00000221998 324 ntBASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-7-dv9A0A075B639 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Golph3-205ENSMUST00000228671 2842 ntBASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-7-dv9A0A075B639 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-7-dv9A0A075B639 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6-7-dv9A0A075B639 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms