Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Gm9847-201ENSMUST00000052528 599 ntBASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9n-4A0A075B631 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9n-4A0A075B631 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9n-4A0A075B631 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9n-4A0A075B631 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Gm43137-201ENSMUST00000198052 594 ntBASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9n-4A0A075B631 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9n-4A0A075B631 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms