Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm15546-201ENSMUST00000122095 826 ntBASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm5812-201ENSMUST00000061073 957 ntBASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Serp2-204ENSMUST00000228055 705 ntBASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Gm9959-201ENSMUST00000068277 390 ntBASIC16.02■□□□□ 0.16
Trav15d-1-dv6d-1A0A075B624 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav15d-1-dv6d-1A0A075B624 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 183.9 ms