Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-6A0A075B603 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Gm22238-201ENSMUST00000175222 88 ntBASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-6A0A075B603 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Gm9959-201ENSMUST00000068277 390 ntBASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-6A0A075B603 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-6A0A075B603 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-6A0A075B603 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-6A0A075B603 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms