Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Gm6365-201ENSMUST00000054711 744 ntBASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-1A0A075B5Z7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-1A0A075B5Z7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Gm29257-201ENSMUST00000186115 639 ntBASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-1A0A075B5Z7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-1A0A075B5Z7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-1A0A075B5Z7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Trav5-1A0A075B5Z7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Trav5-1A0A075B5Z7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav5-1A0A075B5Z7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav5-1A0A075B5Z7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Golph3-202ENSMUST00000226517 2359 ntBASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav5-1A0A075B5Z7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-1A0A075B5Z7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms