Protein–RNA interactions for Protein: S4R2P9

Slc8a3, Sodium/calcium exchanger 3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc8a3S4R2P9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc8a3S4R2P9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc8a3S4R2P9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc8a3S4R2P9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc8a3S4R2P9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc8a3S4R2P9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc8a3S4R2P9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc8a3S4R2P9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc8a3S4R2P9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc8a3S4R2P9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc8a3S4R2P9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc8a3S4R2P9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc8a3S4R2P9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.05■□□□□ 0.64
Slc8a3S4R2P9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms