Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H2afb3S4R1G7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb3S4R1G7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
H2afb3S4R1G7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17■□□□□ 0.31
H2afb3S4R1G7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17■□□□□ 0.31
H2afb3S4R1G7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17■□□□□ 0.31
H2afb3S4R1G7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afb3S4R1G7 Spcs1-204ENSMUST00000226782 949 ntBASIC17■□□□□ 0.31
H2afb3S4R1G7 Gm32699-201ENSMUST00000221728 1988 ntBASIC17■□□□□ 0.31
H2afb3S4R1G7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afb3S4R1G7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afb3S4R1G7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Gm13241-201ENSMUST00000094493 780 ntBASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Golph3-205ENSMUST00000228671 2842 ntBASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H2afb3S4R1G7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.96■□□□□ 0.31
H2afb3S4R1G7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb3S4R1G7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
H2afb3S4R1G7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
H2afb3S4R1G7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms