Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Crlf3Q9Z2L7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Crlf3Q9Z2L7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Crlf3Q9Z2L7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.1■□□□□ 0.65
Crlf3Q9Z2L7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Crlf3Q9Z2L7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.1■□□□□ 0.65
Crlf3Q9Z2L7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.1■□□□□ 0.65
Crlf3Q9Z2L7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crlf3Q9Z2L7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Crlf3Q9Z2L7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Crlf3Q9Z2L7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Crlf3Q9Z2L7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Crlf3Q9Z2L7 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.08■□□□□ 0.65
Crlf3Q9Z2L7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Crlf3Q9Z2L7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
Crlf3Q9Z2L7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Crlf3Q9Z2L7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Crlf3Q9Z2L7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Crlf3Q9Z2L7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.08■□□□□ 0.64
Crlf3Q9Z2L7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Crlf3Q9Z2L7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Crlf3Q9Z2L7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Crlf3Q9Z2L7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms