Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phf1Q9Z1B8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.41■□□□□ 0.38
Phf1Q9Z1B8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phf1Q9Z1B8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phf1Q9Z1B8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phf1Q9Z1B8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Phf1Q9Z1B8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phf1Q9Z1B8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phf1Q9Z1B8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phf1Q9Z1B8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phf1Q9Z1B8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Phf1Q9Z1B8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Gm27011-201ENSMUST00000182352 972 ntBASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Phf1Q9Z1B8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Phf1Q9Z1B8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Phf1Q9Z1B8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Phf1Q9Z1B8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms