Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lhx9Q9WUH2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx9Q9WUH2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx9Q9WUH2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Mir5133-201ENSMUST00000174955 77 ntBASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx9Q9WUH2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx9Q9WUH2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Lhx9Q9WUH2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Lhx9Q9WUH2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx9Q9WUH2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.02■□□□□ 0.48
Lhx9Q9WUH2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx9Q9WUH2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Lhx9Q9WUH2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lhx9Q9WUH2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx9Q9WUH2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx9Q9WUH2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms