Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col13a1Q9R1N9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col13a1Q9R1N9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col13a1Q9R1N9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col13a1Q9R1N9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col13a1Q9R1N9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col13a1Q9R1N9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col13a1Q9R1N9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col13a1Q9R1N9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Gm38205-201ENSMUST00000192243 258 ntBASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col13a1Q9R1N9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col13a1Q9R1N9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Gm27275-201ENSMUST00000184318 272 ntBASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col13a1Q9R1N9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col13a1Q9R1N9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col13a1Q9R1N9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col13a1Q9R1N9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms