Protein–RNA interactions for Protein: Q9QZS0

Col4a3, Collagen alpha-3(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3Q9QZS0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3Q9QZS0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3Q9QZS0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3Q9QZS0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3Q9QZS0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3Q9QZS0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3Q9QZS0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3Q9QZS0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col4a3Q9QZS0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.7■□□□□ 0.91
Col4a3Q9QZS0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3Q9QZS0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3Q9QZS0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3Q9QZS0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3Q9QZS0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a3Q9QZS0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col4a3Q9QZS0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.67■□□□□ 0.9
Col4a3Q9QZS0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a3Q9QZS0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.65■□□□□ 0.9
Col4a3Q9QZS0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms