Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cacna1fQ9JIS7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Cacna1fQ9JIS7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Cacna1fQ9JIS7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Cacna1fQ9JIS7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1fQ9JIS7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cacna1fQ9JIS7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1fQ9JIS7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1fQ9JIS7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1fQ9JIS7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.78■■□□□ 1.08
Cacna1fQ9JIS7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Mir1199-201ENSMUST00000117015 119 ntBASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1fQ9JIS7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cacna1fQ9JIS7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Mir6982-201ENSMUST00000184354 68 ntBASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cacna1fQ9JIS7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1fQ9JIS7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1fQ9JIS7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1fQ9JIS7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1fQ9JIS7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.73■■□□□ 1.07
Cacna1fQ9JIS7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1fQ9JIS7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.73■■□□□ 1.07
Cacna1fQ9JIS7 Gm37055-201ENSMUST00000191866 133 ntBASIC21.73■■□□□ 1.07
Cacna1fQ9JIS7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms