Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn3Q9ES97 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn3Q9ES97 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rtn3Q9ES97 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn3Q9ES97 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn3Q9ES97 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn3Q9ES97 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rtn3Q9ES97 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.09■□□□□ 0.81
Rtn3Q9ES97 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.09■□□□□ 0.81
Rtn3Q9ES97 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtn3Q9ES97 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtn3Q9ES97 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn3Q9ES97 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn3Q9ES97 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn3Q9ES97 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn3Q9ES97 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rtn3Q9ES97 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.07■□□□□ 0.8
Rtn3Q9ES97 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rtn3Q9ES97 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtn3Q9ES97 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Rtn3Q9ES97 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms