Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtp4Q9ER80 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.73■□□□□ 0.43
Rtp4Q9ER80 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtp4Q9ER80 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Gm13234-201ENSMUST00000120010 747 ntBASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtp4Q9ER80 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtp4Q9ER80 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtp4Q9ER80 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Rtp4Q9ER80 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtp4Q9ER80 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rtp4Q9ER80 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Rtp4Q9ER80 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp4Q9ER80 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms