Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nif3l1Q9EQ80 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nif3l1Q9EQ80 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Reep4-203ENSMUST00000226563 1444 ntBASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nif3l1Q9EQ80 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.81■□□□□ 0.6
Nif3l1Q9EQ80 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nif3l1Q9EQ80 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Gm15039-201ENSMUST00000118914 875 ntBASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nif3l1Q9EQ80 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Gm42778-201ENSMUST00000199644 553 ntBASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nif3l1Q9EQ80 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nif3l1Q9EQ80 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nif3l1Q9EQ80 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nif3l1Q9EQ80 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nif3l1Q9EQ80 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nif3l1Q9EQ80 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nif3l1Q9EQ80 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Gm5874-201ENSMUST00000096101 508 ntBASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nif3l1Q9EQ80 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms