Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmg20aQ9DC33 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20aQ9DC33 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.33■□□□□ 0.37
Hmg20aQ9DC33 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20aQ9DC33 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20aQ9DC33 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmg20aQ9DC33 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmg20aQ9DC33 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20aQ9DC33 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20aQ9DC33 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20aQ9DC33 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmg20aQ9DC33 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20aQ9DC33 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20aQ9DC33 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.32■□□□□ 0.36
Hmg20aQ9DC33 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20aQ9DC33 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20aQ9DC33 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmg20aQ9DC33 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmg20aQ9DC33 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmg20aQ9DC33 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmg20aQ9DC33 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmg20aQ9DC33 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms