Protein–RNA interactions for Protein: Q9DBU0

Tm9sf1, Transmembrane 9 superfamily member 1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf1Q9DBU0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tm9sf1Q9DBU0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm9sf1Q9DBU0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tm9sf1Q9DBU0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tm9sf1Q9DBU0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm9sf1Q9DBU0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm9sf1Q9DBU0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tm9sf1Q9DBU0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm9sf1Q9DBU0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Gm15820-201ENSMUST00000201566 728 ntBASIC18.85■□□□□ 0.61
Tm9sf1Q9DBU0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms