Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rrp8Q9DB85 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rrp8Q9DB85 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rrp8Q9DB85 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Gm2559-201ENSMUST00000201323 363 ntBASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rrp8Q9DB85 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rrp8Q9DB85 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rrp8Q9DB85 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Gm22325-201ENSMUST00000158904 308 ntBASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rrp8Q9DB85 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rrp8Q9DB85 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms