Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Echdc3Q9D7J9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Echdc3Q9D7J9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Echdc3Q9D7J9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.39■□□□□ 0.53
Echdc3Q9D7J9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Echdc3Q9D7J9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Echdc3Q9D7J9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Echdc3Q9D7J9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms