Protein–RNA interactions for Protein: Q9D6F4

Gabra4, Gamma-aminobutyric acid receptor subunit alpha-4, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra4Q9D6F4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gabra4Q9D6F4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gabra4Q9D6F4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Mir7075-201ENSMUST00000184187 82 ntBASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gabra4Q9D6F4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gabra4Q9D6F4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gabra4Q9D6F4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Gabra4Q9D6F4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gabra4Q9D6F4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gabra4Q9D6F4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms