Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3404Q9D506 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm3404Q9D506 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Gm13234-201ENSMUST00000120010 747 ntBASIC20.11■□□□□ 0.81
Gm3404Q9D506 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Gm18671-201ENSMUST00000214826 683 ntBASIC20.11■□□□□ 0.81
Gm3404Q9D506 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3404Q9D506 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm3404Q9D506 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.1■□□□□ 0.81
Gm3404Q9D506 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.1■□□□□ 0.81
Gm3404Q9D506 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm3404Q9D506 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3404Q9D506 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3404Q9D506 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3404Q9D506 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3404Q9D506 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3404Q9D506 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3404Q9D506 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Gm3404Q9D506 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3404Q9D506 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm3404Q9D506 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3404Q9D506 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3404Q9D506 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gm3404Q9D506 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3404Q9D506 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
Gm3404Q9D506 Gm10033-202ENSMUST00000211874 928 ntBASIC20.05■□□□□ 0.8
Gm3404Q9D506 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3404Q9D506 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.05■□□□□ 0.8
Gm3404Q9D506 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3404Q9D506 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3404Q9D506 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms