Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Snrnp48Q9D361 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Snrnp48Q9D361 Gm10493-201ENSMUST00000097270 612 ntBASIC18.91■□□□□ 0.62
Snrnp48Q9D361 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snrnp48Q9D361 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snrnp48Q9D361 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snrnp48Q9D361 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Snrnp48Q9D361 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snrnp48Q9D361 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snrnp48Q9D361 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snrnp48Q9D361 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Gm38205-201ENSMUST00000192243 258 ntBASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Gm9988-201ENSMUST00000069786 435 ntBASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Snrnp48Q9D361 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Gm13146-201ENSMUST00000118508 780 ntBASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snrnp48Q9D361 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms