Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chaf1bQ9D0N7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Gm15820-201ENSMUST00000201566 728 ntBASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chaf1bQ9D0N7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chaf1bQ9D0N7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chaf1bQ9D0N7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chaf1bQ9D0N7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chaf1bQ9D0N7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Gm7417-201ENSMUST00000192950 473 ntBASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chaf1bQ9D0N7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.77■□□□□ 0.43
Chaf1bQ9D0N7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chaf1bQ9D0N7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms