Protein–RNA interactions for Protein: Q9CWF2

Tubb2b, Tubulin beta-2B chain, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb2bQ9CWF2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb2bQ9CWF2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tubb2bQ9CWF2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tubb2bQ9CWF2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tubb2bQ9CWF2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tubb2bQ9CWF2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tubb2bQ9CWF2 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Gm7417-201ENSMUST00000192950 473 ntBASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Tubb2bQ9CWF2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb2bQ9CWF2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.23■□□□□ 0.83
Tubb2bQ9CWF2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb2bQ9CWF2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb2bQ9CWF2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb2bQ9CWF2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tubb2bQ9CWF2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tubb2bQ9CWF2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubb2bQ9CWF2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tubb2bQ9CWF2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms