Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Q9CR55 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CR55 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CR55 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CR55 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CR55 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CR55 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q9CR55 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Q9CR55 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Q9CR55 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.51■□□□□ 0.39
Q9CR55 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.51■□□□□ 0.39
Q9CR55 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.51■□□□□ 0.39
Q9CR55 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q9CR55 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.5■□□□□ 0.39
Q9CR55 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Q9CR55 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Gm43566-201ENSMUST00000196851 808 ntBASIC17.5■□□□□ 0.39
Q9CR55 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q9CR55 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q9CR55 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q9CR55 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.49■□□□□ 0.39
Q9CR55 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.49■□□□□ 0.39
Q9CR55 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Q9CR55 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CR55 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.49■□□□□ 0.39
Q9CR55 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Q9CR55 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Q9CR55 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.48■□□□□ 0.39
Q9CR55 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Q9CR55 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Q9CR55 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Q9CR55 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.48■□□□□ 0.39
Q9CR55 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.48■□□□□ 0.39
Q9CR55 Gm45444-201ENSMUST00000211394 898 ntBASIC17.48■□□□□ 0.39
Q9CR55 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Q9CR55 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Q9CR55 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.48■□□□□ 0.39
Q9CR55 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CR55 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.47■□□□□ 0.39
Q9CR55 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 BC021767-201ENSMUST00000126387 1716 ntBASIC17.47■□□□□ 0.39
Q9CR55 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CR55 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Q9CR55 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CR55 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Q9CR55 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms