Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Col25a1Q99MQ5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Dio3-201ENSMUST00000097228 1449 ntBASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Notumos-201ENSMUST00000151998 2659 ntBASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col25a1Q99MQ5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Gm38205-201ENSMUST00000192243 258 ntBASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col25a1Q99MQ5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col25a1Q99MQ5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Ank2-226ENSMUST00000189368 339 ntBASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col25a1Q99MQ5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col25a1Q99MQ5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Gm33142-201ENSMUST00000193913 867 ntBASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col25a1Q99MQ5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms