Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf111Q99ML9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf111Q99ML9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf111Q99ML9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf111Q99ML9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf111Q99ML9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf111Q99ML9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf111Q99ML9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Rnf111Q99ML9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf111Q99ML9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.33■□□□□ 0.53
Rnf111Q99ML9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf111Q99ML9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf111Q99ML9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.33■□□□□ 0.52
Rnf111Q99ML9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf111Q99ML9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf111Q99ML9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.33■□□□□ 0.52
Rnf111Q99ML9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf111Q99ML9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf111Q99ML9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Rnf111Q99ML9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf111Q99ML9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms