Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Scrt1Q99M85 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Gm7977-201ENSMUST00000193787 748 ntBASIC16.6■□□□□ 0.25
Scrt1Q99M85 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Scrt1Q99M85 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scrt1Q99M85 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Scrt1Q99M85 Gm13146-201ENSMUST00000118508 780 ntBASIC16.59■□□□□ 0.25
Scrt1Q99M85 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.59■□□□□ 0.25
Scrt1Q99M85 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scrt1Q99M85 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scrt1Q99M85 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scrt1Q99M85 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scrt1Q99M85 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scrt1Q99M85 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.58■□□□□ 0.25
Scrt1Q99M85 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scrt1Q99M85 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scrt1Q99M85 Gm7290-201ENSMUST00000104990 617 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 Gm12918-201ENSMUST00000120234 636 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 Gm15710-201ENSMUST00000121821 636 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Gm5075-201ENSMUST00000196916 622 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.58■□□□□ 0.24
Scrt1Q99M85 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.58■□□□□ 0.24
Scrt1Q99M85 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scrt1Q99M85 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scrt1Q99M85 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scrt1Q99M85 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scrt1Q99M85 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Gm6211-202ENSMUST00000167849 925 ntBASIC16.55■□□□□ 0.24
Scrt1Q99M85 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Trmt13-210ENSMUST00000198454 880 ntBASIC16.55■□□□□ 0.24
Scrt1Q99M85 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.55■□□□□ 0.24
Scrt1Q99M85 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms